MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Actinomyces bowdenii
WMus004.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 457
bases: 3,191,231 bps
CDS: 2,590
rRNA: 3
Repeat region:
tmRNA: 1
tRNA: 56
misc RNA:
Total features: 2,650
Total number of protein coding genes annotated/found:
2,590
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5001|JADGKF010000072.1
SEQF5001_02295
Genome Viewer
NA
AA
555/185
16-570
hypothetical protein
SEQF5001|JADGKF010000213.1
SEQF5001_01027
Genome Viewer
NA
AA
246/82
18-263
hypothetical protein
SEQF5001|JADGKF010000216.1
SEQF5001_01040
Genome Viewer
NA
AA
921/307
19-939
hypothetical protein
SEQF5001|JADGKF010000282.1
SEQF5001_01391
Genome Viewer
NA
AA
255/85
19-273
GTPase HflX
SEQF5001|JADGKF010000126.1
SEQF5001_00273
Genome Viewer
NA
AA
1152/384
20-1171
Thiamine-binding periplasmic protein
SEQF5001|JADGKF010000019.1
SEQF5001_00873
Genome Viewer
NA
AA
138/46
20-157
Aspartate aminotransferase
SEQF5001|JADGKF010000058.1
SEQF5001_02083
Genome Viewer
NA
AA
726/242
20-745
putative protein
SEQF5001|JADGKF010000005.1
SEQF5001_02103
Genome Viewer
NA
AA
558/186
22-579
GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase
SEQF5001|JADGKF010000247.1
SEQF5001_01213
Genome Viewer
NA
AA
255/85
23-277
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
SEQF5001|JADGKF010000338.1
SEQF5001_01628
Genome Viewer
NA
AA
1062/354
23-1084
hypothetical protein
SEQF5001|JADGKF010000070.1
SEQF5001_02277
Genome Viewer
NA
AA
1197/399
23-1219
hypothetical protein
SEQF5001|JADGKF010000131.1
SEQF5001_00348
Genome Viewer
NA
AA
843/281
24-866
S-methyl-5'-thioadenosine phosphorylase
SEQF5001|JADGKF010000194.1
SEQF5001_00844
Genome Viewer
NA
AA
228/76
24-251
hypothetical protein
SEQF5001|JADGKF010000268.1
SEQF5001_01319
Genome Viewer
NA
AA
795/265
24-818
hypothetical protein
SEQF5001|JADGKF010000300.1
SEQF5001_01516
Genome Viewer
NA
AA
612/204
24-635
hypothetical protein
SEQF5001|JADGKF010000084.1
SEQF5001_02453
Genome Viewer
NA
AA
1221/407
24-1244
Competence protein ComM
SEQF5001|JADGKF010000061.1
SEQF5001_02145
Genome Viewer
NA
AA
711/237
26-736
3'-5' exonuclease DinG
SEQF5001|JADGKF010000147.1
SEQF5001_00473
Genome Viewer
NA
AA
141/47
27-167
hypothetical protein
SEQF5001|JADGKF010000158.1
SEQF5001_00584
Genome Viewer
NA
AA
1755/585
28-1782
hypothetical protein
SEQF5001|JADGKF010000163.1
SEQF5001_00632
Genome Viewer
NA
AA
1398/466
28-1425
hypothetical protein
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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